STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92964.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
SFZ92963.1
Hypothetical protein.
 
    0.828
SFZ92469.1
Glycosyltransferase involved in cell wall bisynthesis.
      0.694
SFZ92961.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.673
SFZ92966.1
Hypothetical protein.
       0.634
SFZ92960.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.626
SFZ92968.1
Polysaccharide pyruvyl transferase family protein WcaK.
  
 
  0.548
SFZ93911.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
  
  0.540
SFZ89646.1
Protein of unknown function.
  
     0.525
SFZ92958.1
Hypothetical protein.
       0.460
SFZ92973.1
Lipopolysaccharide transport system ATP-binding protein.
  
   0.452
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.