STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ91560.1Permease of the drug/metabolite transporter (DMT) superfamily. (304 aa)    
Predicted Functional Partners:
SFZ91561.1
EamA-like transporter family protein.
       0.727
SFZ91563.1
ADP-heptose:LPS heptosyltransferase.
       0.727
SFZ91558.1
Cold shock protein, CspA family.
       0.668
SFZ91556.1
Superfamily II DNA or RNA helicase.
 
    0.557
SFZ91565.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.526
SFZ91899.1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain.
  
     0.472
SFZ91894.1
ATP:ADP antiporter, AAA family.
  
    0.430
SFZ91892.1
Beta-lactamase class A.
  
     0.412
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.