STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ91565.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (191 aa)    
Predicted Functional Partners:
SFZ90569.1
Glutamate synthase (ferredoxin).
    
 0.839
SFZ90763.1
Helix-turn-helix domain-containing protein.
 
 0.629
SFZ91567.1
N-ethylmaleimide reductase.
 
     0.617
SFZ91561.1
EamA-like transporter family protein.
       0.556
SFZ91563.1
ADP-heptose:LPS heptosyltransferase.
       0.556
SFZ90726.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.552
SFZ94335.1
DNA-binding transcriptional regulator, CsgD family.
  
 
  0.527
SFZ91560.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.526
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.518
SFZ91568.1
Dienelactone hydrolase.
  
    0.513
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.