Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFZ90086.1 | SFZ90569.1 | SAMN05428642_101733 | SAMN05428642_1011013 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (ferredoxin). | 0.451 |
SFZ90086.1 | SFZ91683.1 | SAMN05428642_101733 | SAMN05428642_102221 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Proline dehydrogenase. | 0.840 |
SFZ90086.1 | SFZ93725.1 | SAMN05428642_101733 | SAMN05428642_103298 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.674 |
SFZ90569.1 | SFZ90086.1 | SAMN05428642_1011013 | SAMN05428642_101733 | Glutamate synthase (ferredoxin). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.451 |
SFZ90569.1 | SFZ91683.1 | SAMN05428642_1011013 | SAMN05428642_102221 | Glutamate synthase (ferredoxin). | Proline dehydrogenase. | 0.896 |
SFZ90569.1 | SFZ93725.1 | SAMN05428642_1011013 | SAMN05428642_103298 | Glutamate synthase (ferredoxin). | 1-pyrroline-5-carboxylate dehydrogenase. | 0.919 |
SFZ90569.1 | gcvP | SAMN05428642_1011013 | SAMN05428642_101141 | Glutamate synthase (ferredoxin). | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.949 |
SFZ90569.1 | proC | SAMN05428642_1011013 | SAMN05428642_1011259 | Glutamate synthase (ferredoxin). | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.453 |
SFZ90569.1 | proC-2 | SAMN05428642_1011013 | SAMN05428642_1021048 | Glutamate synthase (ferredoxin). | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.453 |
SFZ90569.1 | purL | SAMN05428642_1011013 | SAMN05428642_102784 | Glutamate synthase (ferredoxin). | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.932 |
SFZ91393.1 | SFZ91683.1 | SAMN05428642_10240 | SAMN05428642_102221 | Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Proline dehydrogenase. | 0.698 |
SFZ91683.1 | SFZ90086.1 | SAMN05428642_102221 | SAMN05428642_101733 | Proline dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.840 |
SFZ91683.1 | SFZ90569.1 | SAMN05428642_102221 | SAMN05428642_1011013 | Proline dehydrogenase. | Glutamate synthase (ferredoxin). | 0.896 |
SFZ91683.1 | SFZ91393.1 | SAMN05428642_102221 | SAMN05428642_10240 | Proline dehydrogenase. | Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.698 |
SFZ91683.1 | SFZ93446.1 | SAMN05428642_102221 | SAMN05428642_103138 | Proline dehydrogenase. | Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.698 |
SFZ91683.1 | SFZ93725.1 | SAMN05428642_102221 | SAMN05428642_103298 | Proline dehydrogenase. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.931 |
SFZ91683.1 | SFZ94403.1 | SAMN05428642_102221 | SAMN05428642_104161 | Proline dehydrogenase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.721 |
SFZ91683.1 | gcvP | SAMN05428642_102221 | SAMN05428642_101141 | Proline dehydrogenase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.839 |
SFZ91683.1 | proC | SAMN05428642_102221 | SAMN05428642_1011259 | Proline dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.774 |
SFZ91683.1 | proC-2 | SAMN05428642_102221 | SAMN05428642_1021048 | Proline dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.774 |
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