STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92153.1Protein of unknown function. (295 aa)    
Predicted Functional Partners:
SFZ92155.1
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
      0.935
SFZ92157.1
RNA polymerase Rpb6.
 
     0.920
SFZ92159.1
Outer membrane protein assembly factor BamD.
 
     0.911
SFZ90773.1
Cell surface protein SprA.
  
     0.773
SFZ89329.1
Hypothetical protein.
  
     0.772
SFZ93736.1
Protein of unknown function.
  
     0.759
SFZ92151.1
DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.
 
     0.732
SFZ90079.1
Tetratricopeptide repeat-containing protein.
  
     0.707
SFZ90831.1
Chaperone for outer membrane proteins, Skp family.
  
     0.704
SFZ89187.1
Gliding motility-associated lipoprotein GldB.
  
     0.689
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.