Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFZ90086.1 | SFZ92221.1 | SAMN05428642_101733 | SAMN05428642_102598 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Hypothetical protein. | 0.461 |
SFZ90086.1 | SFZ92224.1 | SAMN05428642_101733 | SAMN05428642_102600 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. | 0.493 |
SFZ90086.1 | kmo | SAMN05428642_101733 | SAMN05428642_103343 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.824 |
SFZ90868.1 | SFZ91835.1 | SAMN05428642_1011189 | SAMN05428642_102374 | Methyltransferase domain-containing protein. | Protein of unknown function. | 0.827 |
SFZ90868.1 | SFZ92221.1 | SAMN05428642_1011189 | SAMN05428642_102598 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.496 |
SFZ90868.1 | SFZ92224.1 | SAMN05428642_1011189 | SAMN05428642_102600 | Methyltransferase domain-containing protein. | Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. | 0.496 |
SFZ90868.1 | SFZ94005.1 | SAMN05428642_1011189 | SAMN05428642_103505 | Methyltransferase domain-containing protein. | Phytoene/squalene synthetase. | 0.955 |
SFZ91835.1 | SFZ90868.1 | SAMN05428642_102374 | SAMN05428642_1011189 | Protein of unknown function. | Methyltransferase domain-containing protein. | 0.827 |
SFZ91835.1 | SFZ92221.1 | SAMN05428642_102374 | SAMN05428642_102598 | Protein of unknown function. | Hypothetical protein. | 0.561 |
SFZ91835.1 | SFZ92224.1 | SAMN05428642_102374 | SAMN05428642_102600 | Protein of unknown function. | Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. | 0.561 |
SFZ91835.1 | SFZ94005.1 | SAMN05428642_102374 | SAMN05428642_103505 | Protein of unknown function. | Phytoene/squalene synthetase. | 0.701 |
SFZ91835.1 | kmo | SAMN05428642_102374 | SAMN05428642_103343 | Protein of unknown function. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.661 |
SFZ92219.1 | SFZ92221.1 | SAMN05428642_102597 | SAMN05428642_102598 | Hypothetical protein. | Hypothetical protein. | 0.757 |
SFZ92219.1 | SFZ92223.1 | SAMN05428642_102597 | SAMN05428642_102599 | Hypothetical protein. | DNA-binding response regulator, LytR/AlgR family. | 0.504 |
SFZ92219.1 | SFZ92224.1 | SAMN05428642_102597 | SAMN05428642_102600 | Hypothetical protein. | Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. | 0.504 |
SFZ92219.1 | SFZ92226.1 | SAMN05428642_102597 | SAMN05428642_102601 | Hypothetical protein. | Histidine kinase. | 0.504 |
SFZ92221.1 | SFZ90086.1 | SAMN05428642_102598 | SAMN05428642_101733 | Hypothetical protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.461 |
SFZ92221.1 | SFZ90868.1 | SAMN05428642_102598 | SAMN05428642_1011189 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.496 |
SFZ92221.1 | SFZ91835.1 | SAMN05428642_102598 | SAMN05428642_102374 | Hypothetical protein. | Protein of unknown function. | 0.561 |
SFZ92221.1 | SFZ92219.1 | SAMN05428642_102598 | SAMN05428642_102597 | Hypothetical protein. | Hypothetical protein. | 0.757 |
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