STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92224.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (254 aa)    
Predicted Functional Partners:
SFZ92223.1
DNA-binding response regulator, LytR/AlgR family.
       0.773
SFZ92226.1
Histidine kinase.
       0.773
SFZ94005.1
Phytoene/squalene synthetase.
  
 0.627
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 0.595
SFZ91835.1
Protein of unknown function.
   
 
 0.561
SFZ92221.1
Hypothetical protein.
       0.513
SFZ92219.1
Hypothetical protein.
       0.504
SFZ90868.1
Methyltransferase domain-containing protein.
   
 0.496
SFZ90086.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 
  0.493
SFZ92228.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
       0.471
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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