STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92314.1Iron complex outermembrane recepter protein. (696 aa)    
Predicted Functional Partners:
SFZ92315.1
Hypothetical protein.
 
     0.895
SFZ92324.1
Outer membrane protein TolC.
 
     0.760
SFZ92320.1
Sulfide:quinone oxidoreductase.
 
     0.726
SFZ92325.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.716
SFZ91449.1
Hypothetical protein.
  
     0.678
SFZ90755.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.590
SFZ92329.1
Hypothetical protein.
 
     0.574
SFZ92327.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.548
SFZ89335.1
Hypothetical protein.
  
   0.486
SFZ92272.1
Hypothetical protein.
  
     0.477
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.