Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFZ89333.1 | SFZ89432.1 | SAMN05428642_101167 | SAMN05428642_101269 | PAS fold-containing protein. | Signal transduction histidine kinase. | 0.614 |
SFZ89333.1 | SFZ92521.1 | SAMN05428642_101167 | SAMN05428642_102774 | PAS fold-containing protein. | Protein of unknown function. | 0.494 |
SFZ89421.1 | SFZ92090.1 | SAMN05428642_101258 | SAMN05428642_102524 | Outer membrane protein beta-barrel domain-containing protein. | OstA-like protein. | 0.585 |
SFZ89421.1 | SFZ92521.1 | SAMN05428642_101258 | SAMN05428642_102774 | Outer membrane protein beta-barrel domain-containing protein. | Protein of unknown function. | 0.438 |
SFZ89432.1 | SFZ89333.1 | SAMN05428642_101269 | SAMN05428642_101167 | Signal transduction histidine kinase. | PAS fold-containing protein. | 0.614 |
SFZ89432.1 | SFZ92090.1 | SAMN05428642_101269 | SAMN05428642_102524 | Signal transduction histidine kinase. | OstA-like protein. | 0.482 |
SFZ89432.1 | SFZ92521.1 | SAMN05428642_101269 | SAMN05428642_102774 | Signal transduction histidine kinase. | Protein of unknown function. | 0.468 |
SFZ90049.1 | SFZ90783.1 | SAMN05428642_101712 | SAMN05428642_1011136 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.716 |
SFZ90049.1 | SFZ92521.1 | SAMN05428642_101712 | SAMN05428642_102774 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.460 |
SFZ90783.1 | SFZ90049.1 | SAMN05428642_1011136 | SAMN05428642_101712 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.716 |
SFZ90783.1 | SFZ92521.1 | SAMN05428642_1011136 | SAMN05428642_102774 | Hypothetical protein. | Protein of unknown function. | 0.457 |
SFZ92090.1 | SFZ89421.1 | SAMN05428642_102524 | SAMN05428642_101258 | OstA-like protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.585 |
SFZ92090.1 | SFZ89432.1 | SAMN05428642_102524 | SAMN05428642_101269 | OstA-like protein. | Signal transduction histidine kinase. | 0.482 |
SFZ92090.1 | SFZ92521.1 | SAMN05428642_102524 | SAMN05428642_102774 | OstA-like protein. | Protein of unknown function. | 0.575 |
SFZ92519.1 | SFZ92521.1 | SAMN05428642_102773 | SAMN05428642_102774 | Large subunit ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Protein of unknown function. | 0.518 |
SFZ92519.1 | SFZ92522.1 | SAMN05428642_102773 | SAMN05428642_102775 | Large subunit ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.438 |
SFZ92519.1 | SFZ92524.1 | SAMN05428642_102773 | SAMN05428642_102776 | Large subunit ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Phosphomannomutase. | 0.471 |
SFZ92521.1 | SFZ89333.1 | SAMN05428642_102774 | SAMN05428642_101167 | Protein of unknown function. | PAS fold-containing protein. | 0.494 |
SFZ92521.1 | SFZ89421.1 | SAMN05428642_102774 | SAMN05428642_101258 | Protein of unknown function. | Outer membrane protein beta-barrel domain-containing protein. | 0.438 |
SFZ92521.1 | SFZ89432.1 | SAMN05428642_102774 | SAMN05428642_101269 | Protein of unknown function. | Signal transduction histidine kinase. | 0.468 |
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