STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92690.1Methyltransferase domain-containing protein. (233 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
  0.674
SFZ92689.1
Hypothetical protein.
  
    0.598
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 0.517
SFZ91869.1
ZIP Zinc transporter.
 
     0.488
SFZ92688.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
       0.488
SFZ91384.1
ABC1 family protein.
  
 
 0.487
SFZ89236.1
N-Dimethylarginine dimethylaminohydrolase.
  
  
  0.486
SFZ91014.1
Hypothetical protein.
  
     0.479
SFZ91350.1
Hypothetical protein.
  
 
   0.479
SFZ92687.1
Glycerophosphoryl diester phosphodiesterase.
       0.476
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.