STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92728.1Pectin methylesterase. (745 aa)    
Predicted Functional Partners:
SFZ92733.1
Acetyl esterase/lipase.
  
 0.996
SFZ92721.1
Lysophospholipase L1.
  
 0.989
SFZ92729.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
  
 0.985
SFZ92732.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.931
SFZ92730.1
Protein of unknown function.
 
     0.930
SFZ92731.1
Unsaturated rhamnogalacturonyl hydrolase.
  
 0.930
SFZ89444.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
  
 0.905
SFZ89445.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
  
 0.901
SFZ89448.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
  
 0.892
SFZ89461.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.864
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.