SFZ93814.1 protein (Flaviramulus basaltis) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

SFZ93814.1

Hypothetical protein. (259 aa)

Predicted Functional Partners:

SFZ93816.1

0.870

SFZ92157.1

0.741

SFZ90833.1

0.724

SFZ89596.1

0.722

SFZ91352.1

0.702

SFZ93303.1

0.696

lspA-2

0.690

SFZ92685.1

0.687

SFZ89798.1

0.676

SFZ91015.1

0.663

Your Current Organism:

Flaviramulus basaltis

NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFZ89596.1	SFZ89798.1	SAMN05428642_101435	SAMN05428642_101568	uroporphyrinogen-III synthase.	RNA polymerase-binding transcription factor DksA.	0.413
SFZ89596.1	SFZ90833.1	SAMN05428642_101435	SAMN05428642_1011166	uroporphyrinogen-III synthase.	Outer membrane protein insertion porin family.	0.472
SFZ89596.1	SFZ91015.1	SAMN05428642_101435	SAMN05428642_1011343	uroporphyrinogen-III synthase.	Lipopolysaccharide-assembly.	0.451
SFZ89596.1	SFZ91352.1	SAMN05428642_101435	SAMN05428642_10217	uroporphyrinogen-III synthase.	Protein of unknown function.	0.771
SFZ89596.1	SFZ92157.1	SAMN05428642_101435	SAMN05428642_102562	uroporphyrinogen-III synthase.	RNA polymerase Rpb6.	0.724
SFZ89596.1	SFZ92685.1	SAMN05428642_101435	SAMN05428642_102884	uroporphyrinogen-III synthase.	Lipoprotein-releasing system permease protein.	0.428
SFZ89596.1	SFZ93303.1	SAMN05428642_101435	SAMN05428642_10356	uroporphyrinogen-III synthase.	Putative negative regulator of RcsB-dependent stress response.	0.467
SFZ89596.1	SFZ93814.1	SAMN05428642_101435	SAMN05428642_103350	uroporphyrinogen-III synthase.	Hypothetical protein.	0.722
SFZ89798.1	SFZ89596.1	SAMN05428642_101568	SAMN05428642_101435	RNA polymerase-binding transcription factor DksA.	uroporphyrinogen-III synthase.	0.413
SFZ89798.1	SFZ90833.1	SAMN05428642_101568	SAMN05428642_1011166	RNA polymerase-binding transcription factor DksA.	Outer membrane protein insertion porin family.	0.624
SFZ89798.1	SFZ91015.1	SAMN05428642_101568	SAMN05428642_1011343	RNA polymerase-binding transcription factor DksA.	Lipopolysaccharide-assembly.	0.498
SFZ89798.1	SFZ92157.1	SAMN05428642_101568	SAMN05428642_102562	RNA polymerase-binding transcription factor DksA.	RNA polymerase Rpb6.	0.863
SFZ89798.1	SFZ93303.1	SAMN05428642_101568	SAMN05428642_10356	RNA polymerase-binding transcription factor DksA.	Putative negative regulator of RcsB-dependent stress response.	0.437
SFZ89798.1	SFZ93814.1	SAMN05428642_101568	SAMN05428642_103350	RNA polymerase-binding transcription factor DksA.	Hypothetical protein.	0.676
SFZ89798.1	lspA-2	SAMN05428642_101568	SAMN05428642_101567	RNA polymerase-binding transcription factor DksA.	Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.	0.737
SFZ90833.1	SFZ89596.1	SAMN05428642_1011166	SAMN05428642_101435	Outer membrane protein insertion porin family.	uroporphyrinogen-III synthase.	0.472
SFZ90833.1	SFZ89798.1	SAMN05428642_1011166	SAMN05428642_101568	Outer membrane protein insertion porin family.	RNA polymerase-binding transcription factor DksA.	0.624
SFZ90833.1	SFZ91015.1	SAMN05428642_1011166	SAMN05428642_1011343	Outer membrane protein insertion porin family.	Lipopolysaccharide-assembly.	0.724
SFZ90833.1	SFZ91352.1	SAMN05428642_1011166	SAMN05428642_10217	Outer membrane protein insertion porin family.	Protein of unknown function.	0.411
SFZ90833.1	SFZ92157.1	SAMN05428642_1011166	SAMN05428642_102562	Outer membrane protein insertion porin family.	RNA polymerase Rpb6.	0.548