STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ94026.1Glycosyltransferase involved in cell wall bisynthesis. (340 aa)    
Predicted Functional Partners:
SFZ94028.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.823
SFZ94031.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.811
SFZ94024.1
Hypothetical protein.
       0.762
SFZ94034.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.726
SFZ94022.1
UDPglucose 6-dehydrogenase.
  
    0.700
SFZ94029.1
Hypothetical protein.
 
     0.669
SFZ93996.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.583
SFZ94038.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.581
SFZ94041.1
Colanic acid biosynthesis glycosyl transferase WcaI.
 
     0.579
SFZ94036.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
 
    0.575
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.