STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ94821.1Nucleotide-binding universal stress protein, UspA family. (276 aa)    
Predicted Functional Partners:
SFZ94830.1
MFS transporter, DHA1 family, multidrug resistance protein.
 
     0.880
SFZ94822.1
Restriction endonuclease.
 
     0.870
SFZ94826.1
Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.845
SFZ94825.1
Thymidine phosphorylase.
 
    0.843
SFZ94812.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)).
 
    0.799
SFZ94815.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.740
SFZ94828.1
Hypothetical protein.
 
     0.709
SFZ94820.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.689
SFZ94808.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.682
SFZ94829.1
Cu2+-exporting ATPase.
 
     0.674
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.