STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ94837.1Conjugative transposon protein TraO. (181 aa)    
Predicted Functional Partners:
SFZ94838.1
Protein of unknown function.
       0.785
SFZ94843.1
Hypothetical protein.
     
 0.770
SFZ94841.1
Bacteroides conjugative transposon TraK protein.
     
 0.768
SFZ94840.1
Protein of unknown function.
       0.764
SFZ94835.1
Hypothetical protein.
       0.762
SFZ94847.1
Bacteroides conjugation system ATPase, TraG family.
       0.748
SFZ94845.1
Hypothetical protein.
       0.746
SFZ94834.1
Transposase.
       0.570
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.