STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ94925.1Gliding motility associated protien GldN. (296 aa)    
Predicted Functional Partners:
SFZ89331.1
Gliding motility-associated lipoprotein GldJ.
 
   
 0.866
SFZ95324.1
Gliding motility-associated protein GldM.
 
   
 0.851
SFZ91023.1
Gliding motility-associated lipoprotein GldK.
 
   
 0.848
SFZ90079.1
Tetratricopeptide repeat-containing protein.
  
   
 0.839
SFZ90773.1
Cell surface protein SprA.
  
   
 0.834
SFZ91024.1
Gliding motility-associated protein GldL.
 
   
 0.808
SFZ94093.1
Gliding motility-associated protein GldL.
 
   
 0.799
SFZ94927.1
Hypothetical protein.
 
   
 0.787
SFZ93703.1
Outer membrane protein beta-barrel domain-containing protein.
  
   
 0.782
SFZ89187.1
Gliding motility-associated lipoprotein GldB.
  
   
 0.781
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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