STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ95018.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
SFZ89549.1
Hypothetical protein.
  
     0.746
SFZ89550.1
Hypothetical protein.
  
     0.737
SFZ93413.1
Hypothetical protein.
  
     0.721
SFZ93378.1
Hypothetical protein.
  
     0.720
SFZ93032.1
Hypothetical protein.
  
     0.714
SFZ89507.1
Protein of unknown function.
  
     0.650
SFZ89548.1
Type IV secretory system Conjugative DNA transfer.
  
     0.633
SFZ89506.1
Protein of unknown function.
  
     0.622
SFZ89508.1
Hypothetical protein.
  
     0.601
SFZ89511.1
Bacteroides conjugation system ATPase, TraG family.
  
     0.594
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.