STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ95079.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
SFZ89817.1
Protein of unknown function.
  
     0.749
SFZ93854.1
Molecular chaperone HtpG.
   
 0.728
SFZ93778.1
CarboxypepD_reg-like domain-containing protein.
  
     0.667
SFZ92090.1
OstA-like protein.
  
    0.639
SFZ91629.1
Membrane protein YqaA, SNARE-associated domain.
  
     0.629
SFZ95078.1
Ribosome-associated heat shock protein Hsp15.
       0.619
SFZ93321.1
Signal peptidase I; Belongs to the peptidase S26 family.
 
   
 0.604
SFZ90035.1
Hypothetical protein.
  
     0.562
SFZ92437.1
Hypothetical protein.
  
     0.562
SFZ90781.1
Protein TonB.
  
     0.554
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.