Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABP53169.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
ABP53170.1
PFAM: flavin reductase domain protein, FMN-binding.
       0.773
ABP53978.1
Hypothetical protein.
  
     0.624
ABP53763.1
PFAM: protein of unknown function DUF664.
  
     0.617
ABP53166.1
Hypothetical protein.
       0.605
argG
PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.605
ABP53168.1
PFAM: formyl transferase domain protein.
       0.605
ABP53164.1
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase.
       0.582
ABP53165.1
PFAM: Thioesterase; condensation domain protein.
       0.582
ABP56396.1
Hypothetical protein.
  
     0.571
ABP53149.1
Hypothetical protein.
       0.570
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.