Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABP53286.1PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (437 aa)    
Predicted Functional Partners:
ABP53285.1
PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ABP53287.1
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
ABP53284.1
PFAM: basic membrane lipoprotein.
 
 
 0.994
ABP53288.1
TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding.
 
  
 0.920
ABP53289.1
TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase, family 3; Pyrimidine nucleoside phosphorylase, C-terminal domain.
     
 0.768
ABP53290.1
Hypothetical protein.
       0.554
ABP53283.1
Hypothetical protein.
       0.425
ABP53240.1
PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.403
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.