Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABP53846.1 | ABP54021.1 | Strop_1379 | Strop_1555 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | PFAM: bifunctional deaminase-reductase domain protein. | 0.427 |
| ABP53846.1 | ABP54337.1 | Strop_1379 | Strop_1875 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | 0.926 |
| ABP53846.1 | ribBA | Strop_1379 | Strop_1877 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | 0.811 |
| ABP53846.1 | ribH | Strop_1379 | Strop_1878 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.934 |
| ABP54021.1 | ABP53846.1 | Strop_1555 | Strop_1379 | PFAM: bifunctional deaminase-reductase domain protein. | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | 0.427 |
| ABP54021.1 | ABP54022.1 | Strop_1555 | Strop_1556 | PFAM: bifunctional deaminase-reductase domain protein. | PFAM: plasmid pRiA4b ORF-3 family protein. | 0.559 |
| ABP54021.1 | ABP54337.1 | Strop_1555 | Strop_1875 | PFAM: bifunctional deaminase-reductase domain protein. | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | 0.755 |
| ABP54021.1 | ribBA | Strop_1555 | Strop_1877 | PFAM: bifunctional deaminase-reductase domain protein. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | 0.858 |
| ABP54021.1 | ribH | Strop_1555 | Strop_1878 | PFAM: bifunctional deaminase-reductase domain protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.589 |
| ABP54022.1 | ABP54021.1 | Strop_1556 | Strop_1555 | PFAM: plasmid pRiA4b ORF-3 family protein. | PFAM: bifunctional deaminase-reductase domain protein. | 0.559 |
| ABP54337.1 | ABP53846.1 | Strop_1875 | Strop_1379 | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | 0.926 |
| ABP54337.1 | ABP54021.1 | Strop_1875 | Strop_1555 | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | PFAM: bifunctional deaminase-reductase domain protein. | 0.755 |
| ABP54337.1 | ribBA | Strop_1875 | Strop_1877 | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | 0.999 |
| ABP54337.1 | ribH | Strop_1875 | Strop_1878 | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.999 |
| ribBA | ABP53846.1 | Strop_1877 | Strop_1379 | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | 0.811 |
| ribBA | ABP54021.1 | Strop_1877 | Strop_1555 | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | PFAM: bifunctional deaminase-reductase domain protein. | 0.858 |
| ribBA | ABP54337.1 | Strop_1877 | Strop_1875 | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein. | 0.999 |
| ribBA | ribH | Strop_1877 | Strop_1878 | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.999 |
| ribH | ABP53846.1 | Strop_1878 | Strop_1379 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; Belongs to the ribF family. | 0.934 |
| ribH | ABP54021.1 | Strop_1878 | Strop_1555 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | PFAM: bifunctional deaminase-reductase domain protein. | 0.589 |
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