Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABP54459.1PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (378 aa)    
Predicted Functional Partners:
ABP54457.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.996
ABP54458.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
  
 0.989
ABP54460.1
PFAM: extracellular solute-binding protein, family 1.
 
 
 0.971
ABP54990.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.941
ABP56661.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.890
ABP54659.1
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
    
0.837
ABP55283.1
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
    
0.808
ABP53320.1
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
    
0.796
ABP56660.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.779
ABP54462.1
PFAM: FAD dependent oxidoreductase.
 
  
 0.749
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.