Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABP54647.1PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (503 aa)    
Predicted Functional Partners:
ABP54648.1
PFAM: cyclase/dehydrase.
 
     0.762
ABP54649.1
PFAM: monooxygenase, FAD-binding.
 
    
0.732
ABP54650.1
PFAM: monooxygenase, FAD-binding.
 
    
0.705
ABP54646.1
hydroxyneurosporene-O-methyltransferase; PFAM: O-methyltransferase, family 2.
       0.605
ABP55101.1
PFAM: monooxygenase, FAD-binding.
  
     0.527
ABP54651.1
Hypothetical protein.
     
 0.515
ABP53564.1
PFAM: monooxygenase, FAD-binding.
  
     0.480
ABP53723.1
PFAM: monooxygenase, FAD-binding.
  
     0.410
ABP54645.1
PFAM: short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.404
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
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