Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1A9W226 | A0A1A9W3L6 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Uncharacterized protein. | 0.949 |
A0A1A9W226 | A0A1A9W7C8 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Uncharacterized protein. | 0.810 |
A0A1A9W226 | A0A1A9WH20 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | ATG11 domain-containing protein. | 0.656 |
A0A1A9W226 | A0A1A9WMQ7 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | 0.937 |
A0A1A9W226 | A0A1A9WPA1 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Phosphatidylinositol 3-kinase catalytic subunit type 3. | 0.848 |
A0A1A9W226 | A0A1A9WUR9 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Uncharacterized protein. | 0.719 |
A0A1A9W226 | A0A1A9WY05 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Uncharacterized protein. | 0.719 |
A0A1A9W226 | A0A1A9X331 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Protein kinase domain-containing protein. | 0.993 |
A0A1A9W3L6 | A0A1A9W226 | Uncharacterized protein. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.949 |
A0A1A9W3L6 | A0A1A9W7C8 | Uncharacterized protein. | Uncharacterized protein. | 0.577 |
A0A1A9W3L6 | A0A1A9WB05 | Uncharacterized protein. | Uncharacterized protein. | 0.931 |
A0A1A9W3L6 | A0A1A9WH20 | Uncharacterized protein. | ATG11 domain-containing protein. | 0.678 |
A0A1A9W3L6 | A0A1A9WMQ7 | Uncharacterized protein. | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | 0.625 |
A0A1A9W3L6 | A0A1A9WPA1 | Uncharacterized protein. | Phosphatidylinositol 3-kinase catalytic subunit type 3. | 0.599 |
A0A1A9W3L6 | A0A1A9WUR9 | Uncharacterized protein. | Uncharacterized protein. | 0.496 |
A0A1A9W3L6 | A0A1A9WY05 | Uncharacterized protein. | Uncharacterized protein. | 0.496 |
A0A1A9W3L6 | A0A1A9X331 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.995 |
A0A1A9W7C8 | A0A1A9W226 | Uncharacterized protein. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.810 |
A0A1A9W7C8 | A0A1A9W3L6 | Uncharacterized protein. | Uncharacterized protein. | 0.577 |
A0A1A9W7C8 | A0A1A9WB05 | Uncharacterized protein. | Uncharacterized protein. | 0.713 |
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