STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)    
Predicted Functional Partners:
LOC108249566
Ubiquitin-conjugating enzyme E2 variant 1.
   
0.985
ENSKMAP00000029729
TMEM189_B_dmain domain-containing protein.
   
 0.985
trip12
Thyroid hormone receptor interactor 12.
   
 0.956
ubb
Uncharacterized protein.
   
 0.950
rps27a
Ribosomal protein S27a.
   
 0.943
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.937
LOC108242417
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.900
uba6
Ubiquitin like modifier activating enzyme 6.
   
 0.849
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.849
LOC108231167
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
   
 0.849
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.