Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATAD3A | fam210a | ENSKMAP00000029189 | ENSKMAP00000000169 | ATPase family AAA domain containing 3A. | Family with sequence similarity 210 member Ab. | 0.587 |
ATAD3A | gfm1 | ENSKMAP00000029189 | ENSKMAP00000028031 | ATPase family AAA domain containing 3A. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | 0.447 |
LOC108241114 | LOC108241919 | ENSKMAP00000025495 | ENSKMAP00000020282 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.900 |
LOC108241114 | fam210a | ENSKMAP00000025495 | ENSKMAP00000000169 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Family with sequence similarity 210 member Ab. | 0.442 |
LOC108241919 | LOC108241114 | ENSKMAP00000020282 | ENSKMAP00000025495 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.900 |
LOC108241919 | fam210a | ENSKMAP00000020282 | ENSKMAP00000000169 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Family with sequence similarity 210 member Ab. | 0.442 |
fam210a | ATAD3A | ENSKMAP00000000169 | ENSKMAP00000029189 | Family with sequence similarity 210 member Ab. | ATPase family AAA domain containing 3A. | 0.587 |
fam210a | LOC108241114 | ENSKMAP00000000169 | ENSKMAP00000025495 | Family with sequence similarity 210 member Ab. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.442 |
fam210a | LOC108241919 | ENSKMAP00000000169 | ENSKMAP00000020282 | Family with sequence similarity 210 member Ab. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.442 |
fam210a | gfm1 | ENSKMAP00000000169 | ENSKMAP00000028031 | Family with sequence similarity 210 member Ab. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | 0.567 |
gfm1 | ATAD3A | ENSKMAP00000028031 | ENSKMAP00000029189 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | ATPase family AAA domain containing 3A. | 0.447 |
gfm1 | fam210a | ENSKMAP00000028031 | ENSKMAP00000000169 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] | Family with sequence similarity 210 member Ab. | 0.567 |