STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (415 aa)    
Predicted Functional Partners:
ptch2
Patched 2.
   
 0.990
ptch1
Patched 1.
   
 0.986
hhip
Hedgehog interacting protein.
    
 0.978
boc
BOC cell adhesion associated, oncogene regulated.
    
 0.978
ENSKMAP00000002396
Uncharacterized protein.
    
 0.953
Gas1
Growth arrest-specific 1a.
    
 0.950
lrp2
Low density lipoprotein receptor-related protein 2a.
     
 0.905
LOC108240386
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
  
  
 
0.903
disp1
Dispatched homolog 1 (Drosophila).
   
 0.899
disp2
Dispatched homolog 2 (Drosophila).
   
 0.810
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.