STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
igbp1Immunoglobulin (CD79A) binding protein 1. (362 aa)    
Predicted Functional Partners:
LOC108240607
Serine/threonine-protein phosphatase.
    
 0.985
ppp2cb
Serine/threonine-protein phosphatase.
    
 0.985
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.985
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.971
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.968
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.966
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.965
ENSKMAP00000008045
Uncharacterized protein.
   
 
 0.931
PPP6C
Serine/threonine-protein phosphatase.
   
 
 0.931
akt1s1
AKT1 substrate 1 (proline-rich).
     
 0.912
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.