STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108242714Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1949 aa)    
Predicted Functional Partners:
LOC108244607
Zgc:153867.
   
 0.973
LOC108235799
Uncharacterized protein.
   
 0.973
LOC108239884
Myosin, light chain 9a, regulatory.
   
 0.965
LOC108232979
Myosin light chain 12B.
   
 0.964
LOC108230493
Myosin, light chain 12, genome duplicate 1.
   
 0.964
MYL2
Myosin light chain 2.
   
 0.952
LOC108250739
Actin alpha 2, smooth muscle.
   
 0.936
actb
Uncharacterized protein.
   
 0.936
LOC108248861
Myosin, heavy chain 10, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.904
myh11
Myosin, heavy chain 11a, smooth muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.904
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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