STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108232951Mannose receptor, C type 1b. (1434 aa)    
Predicted Functional Partners:
LOC108232812
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
     
 0.576
LOC108235339
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.564
LOC108248694
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.563
nr5a2
Uncharacterized protein.
   
  
 0.563
naga
Alpha-galactosidase.
      
 0.563
LOC108243741
Nuclear receptor subfamily 5, group A, member 5.
   
  
 0.544
CCKAR
Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.
     
 0.529
LOC108235436
Si:dkey-26c10.5.
    
0.520
ENSKMAP00000004349
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.496
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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