STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000000794Integrase catalytic domain-containing protein. (345 aa)    
Predicted Functional Partners:
ENSKMAP00000029348
Uncharacterized protein.
 
     0.852
ENSKMAP00000015054
Reverse transcriptase domain-containing protein.
 
     0.840
ENSKMAP00000009523
Reverse transcriptase domain-containing protein.
 
     0.825
ENSKMAP00000014401
Reverse transcriptase domain-containing protein.
 
     0.798
ENSKMAP00000014864
Uncharacterized protein.
 
     0.772
ENSKMAP00000016202
Uncharacterized protein.
 
     0.772
ENSKMAP00000024077
Peptidase A2 domain-containing protein.
 
     0.772
ENSKMAP00000003502
Peptidase A2 domain-containing protein.
 
     0.763
ENSKMAP00000005180
Reverse transcriptase domain-containing protein.
 
     0.720
fancm
Helicase C-terminal domain-containing protein.
    
 0.709
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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