STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmtm3CKLF-like MARVEL transmembrane domain containing 3. (171 aa)    
Predicted Functional Partners:
cmtm4
CKLF-like MARVEL transmembrane domain containing 4.
      
 0.648
CKLF
Chemokine like factor.
      
0.646
cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.609
nsa2
NSA2 ribosome biogenesis homolog (S. cerevisiae).
      
 0.584
cmtm8
CKLF-like MARVEL transmembrane domain containing 8b.
      
 0.568
ENSKMAP00000021602
Uncharacterized protein.
      
 0.567
sf3b3
Splicing factor 3b, subunit 3.
      
 0.564
LOC108230668
Proline rich Gla (G-carboxyglutamic acid) 1.
      
 0.487
rbm46
RNA binding motif protein 46.
      
 0.476
kynu
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
      
 0.457
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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