STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108228590Matrix metallopeptidase 11. (449 aa)    
Predicted Functional Partners:
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
 0.813
LOC108228577
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
 0.809
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.624
timp2
TIMP metallopeptidase inhibitor 2a.
   
 0.581
LOC108241333
TIMP metallopeptidase inhibitor 2b.
   
 0.581
ENSKMAP00000003752
Matrix metallopeptidase 20b (enamelysin).
  
0.464
LOC108247974
ZnMc domain-containing protein.
  
0.455
LOC108238146
Matrix metallopeptidase 13b.
  
0.455
LOC108238144
Matrix metallopeptidase 20a (enamelysin).
  
0.446
TIMP4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.419
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.