STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1. (125 aa)    
Predicted Functional Partners:
ctdnep1
CTD nuclear envelope phosphatase 1b.
   
 0.976
ublcp1
Ubiquitin-like domain containing CTD phosphatase 1.
   
 0.584
LOC108230032
FCP1 homology domain-containing protein.
    
 0.578
ctdspl2
CTD small phosphatase like 2.
    
 0.578
CTDSP1
CTD small phosphatase 1.
    
 0.578
LOC108234255
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3.
    
 0.578
ctdspl
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a.
    
 0.578
LOC108247629
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2.
    
 0.578
LOC108244280
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1.
    
 0.578
LOC108238656
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b.
    
 0.578
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.