STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh12orf66Si:ch211-125a15.1. (452 aa)    
Predicted Functional Partners:
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.996
kptn
Kaptin (actin binding protein).
  
 
 0.996
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.992
depdc5
DEP domain containing 5.
   
 0.987
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.984
wdr59
WD repeat domain 59.
    
 0.984
wdr24
WD repeat domain 24.
    
 0.983
nprl3
NPR3-like, GATOR1 complex subunit.
     
 0.822
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
     
 0.753
LOC108246981
CBM21 domain-containing protein.
    
 0.736
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.