STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dynlrb1Dynein light chain roadblock. (96 aa)    
Predicted Functional Partners:
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.923
wdr60
WD repeat domain 60.
   
 0.904
tctex1d2
Tctex1 domain containing 2.
  
 0.876
wdr34
WD repeat domain 34.
   
 0.873
LOC108239494
Dynein, cytoplasmic 1, intermediate chain 2b.
   
 0.852
LOC108240747
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.852
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.852
dnal4
Dynein light chain.
   
 0.827
TCTEX1D1
Tctex1 domain containing 1.
  
 0.826
LOC108236914
Dynein light chain.
   
 0.814
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.