Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSKMAP00000024068 | LOC108230599 | ENSKMAP00000024068 | ENSKMAP00000001762 | Ig-like domain-containing protein. | Si:dkey-235d18.5. | 0.472 |
ENSKMAP00000025284 | LOC108230599 | ENSKMAP00000025284 | ENSKMAP00000001762 | Uncharacterized protein. | Si:dkey-235d18.5. | 0.472 |
LOC108228916 | LOC108230599 | ENSKMAP00000011171 | ENSKMAP00000001762 | Transforming growth factor beta; Belongs to the TGF-beta family. | Si:dkey-235d18.5. | 0.418 |
LOC108228916 | itgb6 | ENSKMAP00000011171 | ENSKMAP00000013905 | Transforming growth factor beta; Belongs to the TGF-beta family. | Integrin beta; Belongs to the integrin beta chain family. | 0.943 |
LOC108228916 | lum | ENSKMAP00000011171 | ENSKMAP00000012254 | Transforming growth factor beta; Belongs to the TGF-beta family. | Lumican. | 0.451 |
LOC108230599 | ENSKMAP00000024068 | ENSKMAP00000001762 | ENSKMAP00000024068 | Si:dkey-235d18.5. | Ig-like domain-containing protein. | 0.472 |
LOC108230599 | ENSKMAP00000025284 | ENSKMAP00000001762 | ENSKMAP00000025284 | Si:dkey-235d18.5. | Uncharacterized protein. | 0.472 |
LOC108230599 | LOC108228916 | ENSKMAP00000001762 | ENSKMAP00000011171 | Si:dkey-235d18.5. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.418 |
LOC108230599 | LOC108235533 | ENSKMAP00000001762 | ENSKMAP00000008396 | Si:dkey-235d18.5. | Microfibril associated protein 5. | 0.449 |
LOC108230599 | MFAP2 | ENSKMAP00000001762 | ENSKMAP00000029241 | Si:dkey-235d18.5. | Microfibril associated protein 2. | 0.479 |
LOC108230599 | arid4a | ENSKMAP00000001762 | ENSKMAP00000024651 | Si:dkey-235d18.5. | AT rich interactive domain 4A (RBP1-like). | 0.418 |
LOC108230599 | arid4b | ENSKMAP00000001762 | ENSKMAP00000014765 | Si:dkey-235d18.5. | Translocase of outer mitochondrial membrane 20. | 0.418 |
LOC108230599 | itgb6 | ENSKMAP00000001762 | ENSKMAP00000013905 | Si:dkey-235d18.5. | Integrin beta; Belongs to the integrin beta chain family. | 0.433 |
LOC108230599 | lum | ENSKMAP00000001762 | ENSKMAP00000012254 | Si:dkey-235d18.5. | Lumican. | 0.635 |
LOC108230599 | slf1 | ENSKMAP00000001762 | ENSKMAP00000005773 | Si:dkey-235d18.5. | SMC5-SMC6 complex localization factor 1. | 0.407 |
LOC108235533 | LOC108230599 | ENSKMAP00000008396 | ENSKMAP00000001762 | Microfibril associated protein 5. | Si:dkey-235d18.5. | 0.449 |
LOC108235533 | MFAP2 | ENSKMAP00000008396 | ENSKMAP00000029241 | Microfibril associated protein 5. | Microfibril associated protein 2. | 0.859 |
MFAP2 | LOC108230599 | ENSKMAP00000029241 | ENSKMAP00000001762 | Microfibril associated protein 2. | Si:dkey-235d18.5. | 0.479 |
MFAP2 | LOC108235533 | ENSKMAP00000029241 | ENSKMAP00000008396 | Microfibril associated protein 2. | Microfibril associated protein 5. | 0.859 |
MFAP2 | lum | ENSKMAP00000029241 | ENSKMAP00000012254 | Microfibril associated protein 2. | Lumican. | 0.482 |
page 1 of 2