STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txlnaTaxilin alpha. (535 aa)    
Predicted Functional Partners:
stx3
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.640
LOC108248034
Syntaxin 4; Belongs to the syntaxin family.
    
 0.638
LOC108228377
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.510
LOC108240947
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.510
LOC108247300
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.473
LOC108240099
Syntaxin 11.
    
 0.406
STX11
Syntaxin 11; Belongs to the syntaxin family.
    
 0.406
ENSKMAP00000020044
SynN domain-containing protein.
    
 0.406
LOC108239059
Syntaxin 11a; Belongs to the syntaxin family.
    
 0.406
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.