STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108238134Peptidoglycan recognition protein 5. (167 aa)    
Predicted Functional Partners:
ATP6
ATP synthase subunit a.
      
 0.526
mitd1
MIT, microtubule interacting and transport, domain containing 1.
      
 0.491
nlrc3
NLR family, CARD domain containing 3.
      
 0.491
tmem121
Transmembrane protein 121Ab.
      
 0.489
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.487
LOC108242702
Peptidoglycan recognition protein 2.
  
  
0.440
sntg1
Syntrophin, gamma 1.
      
 0.408
sntg2
Syntrophin, gamma 2.
      
 0.408
ENSKMAP00000000874
Thrombospondin, type I, domain containing 7Aa.
      
 0.406
thsd7b
Thrombospondin, type I, domain containing 7Ba.
      
 0.406
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.