STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnd1RRM domain-containing protein. (375 aa)    
Predicted Functional Partners:
dazl
Deleted in azoospermia-like.
   
 0.757
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.692
LOC108242889
Tudor domain containing 7 b.
   
 
 0.678
nanos3
Nanos homolog 3; Belongs to the nanos family.
      
 0.662
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
      
 0.662
LOC108236615
Nanos homolog 1; Belongs to the nanos family.
      
 0.621
zeb1
Zinc finger E-box binding homeobox 1b.
    
 
 0.568
LOC108231070
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.565
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.565
vps9d1
VPS9 domain containing 1.
      
 0.564
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.