STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000002434Vitellogenin domain-containing protein. (1289 aa)    
Predicted Functional Partners:
mttp
Microsomal triglyceride transfer protein.
   
 0.822
Itsn2
Uncharacterized protein.
   
 
 0.775
ENSKMAP00000015043
SH3 domain-containing protein.
   
 
 0.775
ENSKMAP00000015068
EF-hand domain-containing protein.
   
 
 0.775
ENSKMAP00000015114
Uncharacterized protein.
   
 
 0.775
ENSKMAP00000026757
Uncharacterized protein.
   
 
 0.775
ENSKMAP00000026786
Uncharacterized protein.
   
 
 0.775
ENSKMAP00000026820
Uncharacterized protein.
   
 
 0.775
apoa4
Apolipoprotein A-Ib.
   
 0.768
LOC108235346
Uncharacterized protein.
   
 0.761
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.