STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd11Major facilitator superfamily domain containing 11. (454 aa)    
Predicted Functional Partners:
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.575
LOC108231792
Major facilitator superfamily domain containing 2B.
      
 0.554
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.554
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.493
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.491
mfsd3
Major facilitator superfamily domain containing 3.
      
 0.489
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.489
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.489
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.444
LOC108233812
Spinster homolog 3 (Drosophila).
      
 0.444
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.