STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot11Acyl-CoA thioesterase 11b. (577 aa)    
Predicted Functional Partners:
etfa
Electron transfer flavoprotein subunit alpha.
    
 0.771
rttn
Rotatin.
      
 0.679
LOC108236374
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.679
etfb
Electron transfer flavoprotein subunit beta.
    
  0.667
cwc25
CWC25 spliceosome associated protein homolog.
   
    0.653
cunh1orf109
C19h1orf109 homolog (H. sapiens).
   
    0.653
ENSKMAP00000028136
Rubicon like autophagy enhancer.
   
    0.653
hadh
Hydroxyacyl-CoA dehydrogenase.
  
 
 0.648
cryl1
Crystallin, lambda 1.
  
 
 0.648
LOC108241061
Thioesterase superfamily member 4.
     
 0.646
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.