kiaa2013 protein (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

kiaa2013

Si:dkeyp-104h9.5. (617 aa)

Predicted Functional Partners:

vps13d

0.630

otud4

0.579

mblac2

0.571

atp6ap1

0.564

LOC108242092

0.489

nsun6

0.485

get3

0.485

pdxdc1

0.473

LOC108244890

0.410

LOC108235297

0.410

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108235297	LOC108242092	ENSKMAP00000026616	ENSKMAP00000000348	ATPase H+ transporting accessory protein 1 like b.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.874
LOC108235297	kiaa2013	ENSKMAP00000026616	ENSKMAP00000002798	ATPase H+ transporting accessory protein 1 like b.	Si:dkeyp-104h9.5.	0.410
LOC108242092	LOC108235297	ENSKMAP00000000348	ENSKMAP00000026616	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	ATPase H+ transporting accessory protein 1 like b.	0.874
LOC108242092	LOC108244890	ENSKMAP00000000348	ENSKMAP00000024953	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	ATPase H+ transporting accessory protein 1 like a.	0.874
LOC108242092	atp6ap1	ENSKMAP00000000348	ENSKMAP00000002638	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	ATPase H+ transporting accessory protein 1b.	0.998
LOC108242092	kiaa2013	ENSKMAP00000000348	ENSKMAP00000002798	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Si:dkeyp-104h9.5.	0.489
LOC108244890	LOC108242092	ENSKMAP00000024953	ENSKMAP00000000348	ATPase H+ transporting accessory protein 1 like a.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.874
LOC108244890	kiaa2013	ENSKMAP00000024953	ENSKMAP00000002798	ATPase H+ transporting accessory protein 1 like a.	Si:dkeyp-104h9.5.	0.410
atp6ap1	LOC108242092	ENSKMAP00000002638	ENSKMAP00000000348	ATPase H+ transporting accessory protein 1b.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.998
atp6ap1	kiaa2013	ENSKMAP00000002638	ENSKMAP00000002798	ATPase H+ transporting accessory protein 1b.	Si:dkeyp-104h9.5.	0.564
get3	kiaa2013	ENSKMAP00000029403	ENSKMAP00000002798	ATPase ASNA1; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. [...]	Si:dkeyp-104h9.5.	0.485
kiaa2013	LOC108235297	ENSKMAP00000002798	ENSKMAP00000026616	Si:dkeyp-104h9.5.	ATPase H+ transporting accessory protein 1 like b.	0.410
kiaa2013	LOC108242092	ENSKMAP00000002798	ENSKMAP00000000348	Si:dkeyp-104h9.5.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.489
kiaa2013	LOC108244890	ENSKMAP00000002798	ENSKMAP00000024953	Si:dkeyp-104h9.5.	ATPase H+ transporting accessory protein 1 like a.	0.410
kiaa2013	atp6ap1	ENSKMAP00000002798	ENSKMAP00000002638	Si:dkeyp-104h9.5.	ATPase H+ transporting accessory protein 1b.	0.564
kiaa2013	get3	ENSKMAP00000002798	ENSKMAP00000029403	Si:dkeyp-104h9.5.	ATPase ASNA1; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. [...]	0.485
kiaa2013	mblac2	ENSKMAP00000002798	ENSKMAP00000009835	Si:dkeyp-104h9.5.	Metallo-beta-lactamase domain containing 2.	0.571
kiaa2013	nsun6	ENSKMAP00000002798	ENSKMAP00000018301	Si:dkeyp-104h9.5.	NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.485
kiaa2013	otud4	ENSKMAP00000002798	ENSKMAP00000006052	Si:dkeyp-104h9.5.	OTU domain-containing protein.	0.579
kiaa2013	pdxdc1	ENSKMAP00000002798	ENSKMAP00000008462	Si:dkeyp-104h9.5.	Pyridoxal-dependent decarboxylase domain containing 1.	0.473