STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108246752Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
LOC108231131
Retinal outer segment membrane protein 1b.
  
 
0.731
LOC108229193
RING-type domain-containing protein.
    
 
 0.590
LOC108230210
PNPLA domain-containing protein.
      
 0.568
LOC108238150
Somatolactin alpha.
   
    0.519
LOC108243233
Growth hormone 1.
   
    0.519
Tmprss7
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.500
LOC108241018
Patatin-like phospholipase domain containing 8.
      
 0.487
grk7
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
  
 0.477
Npy2r
Neuropeptide Y receptor Y2; Belongs to the G-protein coupled receptor 1 family.
   
    0.461
LOC108248295
Neuropeptide Y receptor Y2, like; Belongs to the G-protein coupled receptor 1 family.
   
    0.461
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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