STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108237634Tyrosine-protein kinase. (549 aa)    
Predicted Functional Partners:
syk
Spleen tyrosine kinase.
  
0.956
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
  
0.954
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
0.953
ENSKMAP00000005163
Uncharacterized protein.
 
  
 0.951
egfr
Receptor protein-tyrosine kinase.
    
0.948
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.941
fundc1
Uncharacterized protein.
    
 0.939
LOC108249343
Uncharacterized protein.
    
 0.939
pdgfra
Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
0.938
LOC108248812
Integrin beta; Belongs to the integrin beta chain family.
   
 0.938
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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