STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000003133Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
LOC108251687
Interleukin 10 receptor, beta.
   
 0.703
socs1
Suppressor of cytokine signaling 1a.
   
 
 0.624
LOC108229205
Uncharacterized protein.
    
 0.587
socs3
Suppressor of cytokine signaling 3.
   
 
 0.563
ENSKMAP00000014416
Suppressor of cytokine signaling 3a.
   
 
 0.563
tp53bp2
Tumor protein p53 binding protein, 2a.
   
 0.551
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
   
 0.551
LOC108247016
Protein phosphatase 1, regulatory subunit 13Ba.
   
 0.551
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
   
 0.551
LOC108249788
Uncharacterized protein.
   
 0.530
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.