Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108250900 | mrpl24 | ENSKMAP00000003419 | ENSKMAP00000013778 | Uncharacterized protein. | Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. | 0.571 |
LOC108250900 | sdhaf1 | ENSKMAP00000003419 | ENSKMAP00000015448 | Uncharacterized protein. | Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family. | 0.645 |
LOC108250900 | snx5 | ENSKMAP00000003419 | ENSKMAP00000020021 | Uncharacterized protein. | Sorting nexin; Involved in several stages of intracellular trafficking. | 0.408 |
LOC108250900 | snx6 | ENSKMAP00000003419 | ENSKMAP00000024588 | Uncharacterized protein. | Sorting nexin 6. | 0.408 |
LOC108250900 | ubr3 | ENSKMAP00000003419 | ENSKMAP00000023116 | Uncharacterized protein. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.412 |
mrpl24 | LOC108250900 | ENSKMAP00000013778 | ENSKMAP00000003419 | Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. | Uncharacterized protein. | 0.571 |
sdhaf1 | LOC108250900 | ENSKMAP00000015448 | ENSKMAP00000003419 | Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.645 |
snx5 | LOC108250900 | ENSKMAP00000020021 | ENSKMAP00000003419 | Sorting nexin; Involved in several stages of intracellular trafficking. | Uncharacterized protein. | 0.408 |
snx5 | snx6 | ENSKMAP00000020021 | ENSKMAP00000024588 | Sorting nexin; Involved in several stages of intracellular trafficking. | Sorting nexin 6. | 0.405 |
snx6 | LOC108250900 | ENSKMAP00000024588 | ENSKMAP00000003419 | Sorting nexin 6. | Uncharacterized protein. | 0.408 |
snx6 | snx5 | ENSKMAP00000024588 | ENSKMAP00000020021 | Sorting nexin 6. | Sorting nexin; Involved in several stages of intracellular trafficking. | 0.405 |
ubr3 | LOC108250900 | ENSKMAP00000023116 | ENSKMAP00000003419 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.412 |