STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108230740Notch receptor 2. (2511 aa)    
Predicted Functional Partners:
LOC108241512
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.968
jag1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.949
LOC108249624
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.949
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.938
numb
NUMB endocytic adaptor protein.
   
 0.930
NCSTN
Nicastrin.
    
 0.928
LOC108247327
NUMB like endocytic adaptor protein.
   
 0.928
LOC108237314
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.925
LOC108237295
Beta-1,3-N-acetylglucosaminyltransferase.
    
 0.921
LOC108245159
Beta-1,3-N-acetylglucosaminyltransferase.
    
 0.918
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.