STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000003720Endo/exonuclease/phosphatase domain-containing protein. (464 aa)    
Predicted Functional Partners:
ENSKMAP00000011232
Reverse transcriptase domain-containing protein.
  
     0.460
ENSKMAP00000011768
Reverse transcriptase domain-containing protein.
 
     0.451
ENSKMAP00000015044
Uncharacterized protein.
  
     0.448
ENSKMAP00000020216
Reverse transcriptase domain-containing protein.
 
     0.407
ENSKMAP00000017534
Uncharacterized protein.
  
     0.406
ENSKMAP00000021337
Reverse transcriptase domain-containing protein.
 
     0.401
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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