STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myocMyocilin. (481 aa)    
Predicted Functional Partners:
wdr36
WD repeat domain 36.
      
 0.660
optn
Optineurin.
      
 0.636
eef1aknmt
Methyltransferase like 13.
      
 0.624
fgf10
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.563
LOC108244243
Arylsulfatase family, member J.
      
 0.563
LOC108239334
BAI1-associated protein 2-like 1b.
      
 0.563
LOC108237097
Uncharacterized protein.
    
 
 0.504
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.489
LOC108247157
Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.489
TNXB
Tenascin XB.
   
  
 0.468
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (22%) [HD]